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Extracellular Self-DNA Effects on Yeast Cell Cycle and Transcriptome during Batch Growth

TitleExtracellular Self-DNA Effects on Yeast Cell Cycle and Transcriptome during Batch Growth
Publication TypeArticolo su Rivista peer-reviewed
Year of Publication2024
AuthorsPalomba, Emanuela, Chiusano Maria Luisa, Monticolo Francesco, Langella Maria Chiara, Sanchez Massimo, Tirelli Valentina, de Alteriis Elisabetta, Iannaccone Marco, Termolino Pasquale, Capparelli Rosanna, Carteni Fabrizio, Incerti Guido, and Mazzoleni Stefano
JournalBiomolecules
Volume14
Type of ArticleArticle
ISSN2218273X
Keywordsbatch cell culture, Batch Cell Culture Techniques, Cell cycle, development and aging, DNA, Fungal, gene expression regulation, genetics, Glucose, growth, metabolism, Saccharomyces cerevisiae, transcriptome
Abstract

The cell cycle and the transcriptome dynamics of yeast exposed to extracellular self-DNA during an aerobic batch culture on glucose have been investigated using cytofluorimetric and RNA-seq analyses. In parallel, the same study was conducted on yeast cells growing in the presence of (heterologous) nonself-DNA. The self-DNA treatment determined a reduction in the growth rate and a major elongation of the diauxic lag phase, as well as a significant delay in the achievement of the stationary phase. This was associated with significant changes in the cell cycle dynamics, with slower exit from the G0 phase, followed by an increased level of cell percentage in the S phase, during the cultivation. Comparatively, the exposure to heterologous DNA did not affect the growth curve and the cell cycle dynamics. The transcriptomic analysis showed that self-DNA exposure produced a generalized downregulation of transmembrane transport and an upregulation of genes associated with sulfur compounds and the pentose phosphate pathway. Instead, in the case of the nonself treatment, a clear response to nutrient deprivation was detected. Overall, the presented findings represent further insights into the complex functional mechanisms of self-DNA inhibition. © 2024 by the authors.

Notes

Cited by: 0; All Open Access, Gold Open Access

URLhttps://www.scopus.com/inward/record.uri?eid=2-s2.0-85197187243&doi=10.3390%2fbiom14060663&partnerID=40&md5=a8127e57659fa0e2009721162cfdd55f
DOI10.3390/biom14060663
Citation KeyPalomba2024
PubMed ID38927066